arxiv.org/pdf/0801.2882
arXiv
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by IG Karafyllidis - 2008 - Cited by 11 - Related articles
On the DNA side, a 64-dimensional Hilbert space is used to describe the ... Genetic information for protein synthesis is encoded in nucleotide triplets (codons
In living systems information is stored in DNA using a four nucleotide alphabet. This
information is copied to mRNA and is transferred to the ribosomes. The tRNA Synthetases
recognize the anticodons carried by the tRNA molecules and associate them with the corresponding
amino acids. The tRNA molecules reach the ribosomes, where they are associated with the
corresponding codon of mRNA and the amino acid they carry binds to the polypeptide chain to
form proteins
information is copied to mRNA and is transferred to the ribosomes. The tRNA Synthetases
recognize the anticodons carried by the tRNA molecules and associate them with the corresponding
amino acids. The tRNA molecules reach the ribosomes, where they are associated with the
corresponding codon of mRNA and the amino acid they carry binds to the polypeptide chain to
form proteins
Quantum Mechanical Model for Information Transfer from DNA to Protein
Ioannis G. Karafyllidis
Department of Electrical and Computer Engineering, Democritus University of Thrace, 67100 Xanthi, Greece e-mail: ykar@ee.duth.gr
Abstract. A model for the information transfer from DNA to protein using quantum information and computation techniques is presented. DNA is modeled as the sender and proteins are modeled as the receiver of this information. On the DNA side, a 64-dimensional Hilbert space is used to describe the information stored in DNA triplets (codons). A Hamiltonian matrix is constructed for this space, using the 64 possible codons as base states. The eigenvalues of this matrix are not degenerate. The genetic code is degenerate and proteins comprise only 20 different amino acids. Since information is conserved, the information on the protein side is also described by a 64dimensional Hilbert space, but the eigenvalues of the corresponding Hamiltonian matrix are degenerate. Each amino acid is described by a Hilbert subspace. This change in Hilbert space structure reflects the nature of the processes involved in information transfer from DNA to protei
Ioannis G. Karafyllidis
Department of Electrical and Computer Engineering, Democritus University of Thrace, 67100 Xanthi, Greece e-mail: ykar@ee.duth.gr
Abstract. A model for the information transfer from DNA to protein using quantum information and computation techniques is presented. DNA is modeled as the sender and proteins are modeled as the receiver of this information. On the DNA side, a 64-dimensional Hilbert space is used to describe the information stored in DNA triplets (codons). A Hamiltonian matrix is constructed for this space, using the 64 possible codons as base states. The eigenvalues of this matrix are not degenerate. The genetic code is degenerate and proteins comprise only 20 different amino acids. Since information is conserved, the information on the protein side is also described by a 64dimensional Hilbert space, but the eigenvalues of the corresponding Hamiltonian matrix are degenerate. Each amino acid is described by a Hilbert subspace. This change in Hilbert space structure reflects the nature of the processes involved in information transfer from DNA to protei
Base pair - Wikipedia, the free encyclopedia
https://en.wikipedia.org/wiki/Base_pair
Base pairs (unit: bp), which form between specific nucleobases (also termed nitrogenous bases), are the building blocks of the DNA double helix and contribute ...
Wikipedia
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DNA/RNA transverse current sequencing: intrinsic structural ...
www.ncbi.nlm.nih.gov/.../P...
National Center for Biotechnology Information
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by JR Alvarez - 2015
Jun 19, 2015 - Nanopore DNA sequencing via transverse current has emerged as a promising .... DNA/RNA nucleotides, X, and all possible nucleotide pairs, XY, are ... The MOs of the system {|Ψi〉} belong to a Hilbert space defined by the ...Ultrafast Infrared Vibrational Spectroscopy
https://books.google.com/books?isbn=1466510137
Michael D. Fayer - 2013 - Science
... Hamiltonian parameterization, 414—415 Hilbert space, 416 isotope labeling, ... of DNA oligomers, 59, 63, 64 alternating A—T base pairs, 41 in artificial DNA ...DNA structure in detail
tigger.uic.edu/classes/phys/.../ANJUM04/
Each sugar molecule is covalently linked to one of 4 possible bases ... that there is empty space between the two strands and between the base-pair stacks.
University of Illinois at Chicago
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Advances in Chemical Physics, For Ilya Prigogine
https://books.google.com/books?isbn=0470143029
Stuart A. Rice - 2009 - Science
... 239 coli bacterium, 238 complementary base pairs, 237 DNA polymerases, ... 3 Quantum logics, 5 Hilbert-space model of, 21 Quantum mechanics, 3-5, 10, 20 ...Photochemistry of hydrogen-bonded aromatic pairs ...
www.pnas.org/...
Proceedings of the National Academy of Sciences of t...
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by Z Lan - 2008 - Cited by 49 - Related articles
Jul 25, 2008 - model of the Watson–Crick base pairs in DNA. Multiconfigu- ..... their computation is very expensive when the system Hilbert space is large. We.Full Text
www.pnas.org/...
Proceedings of the National Academy of Sciences of t...
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by Z Lan - 2008 - Cited by 49 - Related articles
Sep 2, 2008 - Recent experimental results for DNA base pairs or biomimetic models ..... of Hamiltonian, lead to a system Hilbert space of dimension 768.[PDF]Quantum Algorithms and the Genetic Code
https://cdsweb.cern.ch/record/426910/files/0002037.pdf
is represented as an N−dimensional Hilbert space, with the N distinct objects as ... Base-pairing during DNA replication can be looked upon as a yes/no query, ...
CERN
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Hilbert space | Leaders in Pharmaceutical Business ...
pharmaceuticalintelligence.com/tag/hilbert-space/
Posts about Hilbert space written by larryhbern. ... Posts Tagged 'Hilbert space' ..... 250px-DNA_labeled DNA diagram showing base pairing circular genome ...
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